Student Publications

Publications coming soon.

Publications coming soon.

Publications coming soon.

Randolph HE, Barreiro LB. Herd Immunity: Understanding COVID-19. Immunity. 2020. May 19;52(5):737-741. [LINK]

Perez-Cervantes C, Smith LA, Nadadur RD, Hughes AEO, Wang S, Corbo JC, Cepko C, Lonfat N, Moskowitz IP. Enhancer transcription identifies cis-regulatory elements for photoreceptor cell types. Development. 2020 Feb 5;147(3):dev184432. [LINK]

Publications coming soon.

Boogerd CJ, Zhu X, Aneas I, Sakabe N, Zhang L, Sobreira DR, Montefiori L, Bogomolovas J, Joslin AC, Zhou B, Chen J, Nobrega MA, Evans SM. Tbx20 Is Required in Mid-Gestation Cardiomyocytes and Plays a Central Role in Atrial Development. Circ Res. 2018. [LINK]

Hart MW, Stover DA, Guerra V, Mozaffari SV, Ober C, Mugal CF, Kaj I. Positive selection on human gamete-recognition genes. PeerJ. 2018. [LINK]

Montefiori LE, Sobreira DR, Sakabe NJ, Aneas I, Joslin AC, Hansen GT, Bozek G, Moskowitz IP, McNally EM, N. A promoter interaction map for cardiovascular disease genetics. Elife. 2018. [LINK]

Mozaffari SV, Stein MM, Magnaye KM, Nicolae DL, Ober C. Parent of origin gene expression in a founder population identifies two new candidate imprinted genes at known imprinted regions. PLoS One. 2018. [LINK]

Sun S, Zhu J, Mozaffari S, Ober C, Chen M, Zhou X. Heritability estimation and differential analysis of count data with generalized linear mixed models in genomic sequencing studies. Bioinformatics. 2018. [LINK]

Wu WS, Huang WC, Brown JS, Zhang D, Song X, Chen H, Tu S, Weng Z, Lee HC. pirScan: a webserver to predict piRNA targeting sites and to avoid transgene silencing in C. Nucleic Acids Res. 2018. [LINK]

Igartua C, Mozaffari SV, Nicolae DL, Ober C. Rare non-coding variants are associated with plasma lipid traits in a founder population. Scientific Reports. 2017. [LINK]

Montefiori L, Hernandez L, Zhang Z, Gilad Y, Ober C, Crawford G, Nobrega M, Jo Sakabe N. Reducing mitochondrial reads in ATAC-seq using CRISPR/Cas9. Scientific Reports. 2017. [LINK]

Kagan (Burrows) C, Kosova G, Herman C, Patterson K, Hartmann KE, Velez Edwards DR, Stephenson MD, Lynch VJ, Ober C. Expression Quantitative Trait Locus Mapping Studies in Mid-secretory Phase Endometrial Cells Identifies HLA-F and TAP2 as Fecundability-Associated Genes. PLoS Genetics. 2016. [LINK]

Kim EJ, Lee U, Heseltine J, Hollerbach R. Geometric structure and geodesic in a solvable model of nonequilibrium process. Physical Review Journals. 2016. [LINK]

Li YI, van de Geijn B, Raj A, Knowles DA, Petti AA, Golan D, Gilad Y, Pritchard JK. RNA splicing is a primary link between genetic variation and disease. Science. 2016. [LINK]

Hulur I, Gamazon ER, Skol AD, Xicola RM, Llor X, Onel K, Ellis NA, Kupfer SS. Enrichment of inflammatory bowel disease and colorectal cancer risk variants in colon expression quantitative trait loci. BMC Genomics. 2015. [LINK]

Lee U, Skinner JJ, Reinitz J, Rosner MR, Kim E-J. Noise-Driven Phenotypic Heterogeneity with Finite Correlation Time in Clonal Populations. PLoS ONE. 2015. [LINK]

Lenneman BR and Rothman-Denes LB. Structural and Biochemical Investigation of Bacteriophage N4-encoded RNA Polymerases. Biomolecules. 2015. [LINK]

Lesko AC, Goss KH, Yang FF, Schwertner A, Hulur I, Onel K, Prosperi JR. The APC tumor suppressor is required for epithelial cell polarization and three-dimensional morphogenesis. Biochimica et biophysica acta. 2015. [LINK]

Lindström S, Thompson DJ, Paterson AD, Li J, Gierach GL, Scott C, Stone J, Douglas JA, Dos-Santos-Silva I, Fernandez-Navarro P, Verghase J, Smith P, Brown J, Luben R, Wareham NJ, Loos RJ, Heit JA, Pankratz VS, Norman A, Goode EL, Cunningham JM, deAndrade M, Vierkant RA, Czene K, Fasching PA, Baglietto L, Southey MC, Giles GG, Shah KP, Chan HP, Helvie MA, Beck AH, Knoblauch NW, Hazra A, Hunter DJ, Kraft P, Pollan M, Figueroa JD, Couch FJ, Hopper JL, Hall P, Easton DF, Boyd NF, Vachon CM, Tamimi RM. Corrigendum: Genome-wide association study identifies multiple loci associated with both mammographic density and breast cancer risk. Nature Communications. 2015. [LINK]

Montaser-Kouhsari L, Knoblauch NW, Oh EY, Baker G, Christensen S, Hazra A, Tamimi RM, Beck AH. Image-guided Coring for Large-scale Studies in Molecular Pathology. Applied Immunohistochemistry and Molecular Morphology. 2015. [LINK]

Oh EY, Christensen SM, Ghanta S, Jeong JC, Bucur O, Glass B, Montaser-Kouhsari L, Knoblauch NW, Bertos N, Saleh SM, Haibe-Kains B, Park M, Beck AH. Extensive rewiring of epithelial-stromal co-expression networks in breast cancer. Genome Biology. 2015. [LINK]